BCS 504 Sensory Systems

Coordinator: Daeyeol Lee (5-8677), dlee@cvs.rochester.edu

Time: 1-3 PM, Tuesday/Thursday.

Place: Kresge Room, Meliora Hall

Lecture formats: didactic lectures given by individaul instructors, as well as seminars organized by David Knill (see below).

Readings: A couple of research/review articles will be assigned to each class. Links to electronic articles will be available on this page. Otherwise, hardcopies will be available in the CVS mail room (DO NOT TAKE AWAY THE ORIGINALS!). Students are encouraged to read the assigned papers before the class.

Evaluation: Midterm (take-home, 30%), final (60%), and class participation (lectures and seminars, 10%).

Date Instructor Readings Subjects
9/4 D. Knill Homework I

Analytical methods I

Linear systems
Fourier analysis
Filtering and convolution

9/6 D. Knill  

Analytical methods II

Signal detection theory
probabilistic modeling

9/11 D. Williams  

Eye/physiological optics I: Image formation

Geometric optics
Schematic eyes
Aberrations
Accommodation

9/13 D. Williams  

Eye/physiological optics II: Retinal factors

Spatial filtering
Spatial sampling

9/18 W. Makous Readings

Psychophysical methods I

Response measurement techniques (e. g., "leg-twitch" exps.)
Constant response methods (e.g., thresholds)

9/20 W. Makous  

Psychophysical methods II

Photometry
Colorimetry

9/25 D. Calkins Reading

Slides (tips on viewing slides)

Retina

Gross Structure and Design
Transduction
Division of Labor: ON and OFF Pathways
Receptive Field Components and Presynaptic Circuits

9/27 D. Calkins Reading

LGN

Central Projections of Retinal Ganglion Cells
Ganglion Cell Projections to LG, Cell Populations
Corticothalamic -thalamocortical projections

10/2 D. Lee Reading II

(Reading I is in the mailroom)

V1: orientation tuning

Laminar and columnar organization of the cortex
Orientation tuning: feedforward vs. feedback models

10/3

(3-5 PM)
D. Knill Paper II

(Paper I is in the mailroom)

Seminar on efficient coding

10/4 D. Lee Reading I

V1: stereopsis

Retinal disparity
Cortical representation of depth

10/9 W. Merigan Reading I
Reading II
Reading III

Object vision I

Ventral cortical pathway in the macaque: V2, V4 and IT
Study of object vision
Perceptual studies: discrimination, naming, categorization, priming
Object representation: viewpoint and ther invariances

10/11 W. Merigan  

Object vision II

Neurophysiology of object vision
Face and object specificities
Columnar organization of object response
Mechanisms of object specificity
Neuropsychology
Functional imaging

10/16 T. Pasternak Reading I,
Reading II
Reading III

Reading IV (in the mailroom)
Physiological basis of motion perception I
10/18 T. Pasternak Slides Physiological basis of motion perception II
10/23 D. Knill  

Models of motion perception I

Reichardt detectors
Energy models
non-Fourier motion

10/25 D. Knill  

Models of motion perception II

The aperture problem
Models of motion processing in MT
Bayesian models of motion coherence

10/26 D. Knill   Seminar on spatio-temporal coherence models
10/30 E. Freedman Slides I
Slides 2
Simulink
ReadMe

Oculomotor system I

Saccadic eye movements
metrics and kinematics
eye plant characteristics
neural control/modelling
SC

11/1 E. Freedman Reading I

Oculomotor system II

Eye-head movements

11/6 D. Calkins Reading I
Reading II

Color Vision I

Psychophysical Assessment of Color Discrimination
Color Matches
Visual Pigments

11/8 D. Calkins  

Color vision II

Visual Sensitivity and Psychophysical Measures of Color Channels
Color Opponency and its Physiological Basis

11/13-15     Break for Neuroscience meeting
11/20 J. Ison  

Auditory system I

Acoustics
Structure of ear
Central auditory pathway

11/27 J. Ison  

Auditory system II

Physiological basis of auditory perception
Sound objects and auditory scene analysis

11/28
10-noon
J. Ison  

Auditory system II

Physiological basis of auditory perception
Sound objects and auditory scene analysis

11/29 G. Paige  

VOR I

Overview of vestibular function
Vestibulo-spinal reflexes (VSR)
Vestibulo-ocular reflexes (VOR)

12/4 G. Paige  

VOR II

Canal-otolith interactions
Cross-modality interactions

12/6     Final Exam
TBD D. Knill Reading I
Reading II
Seminar on population coding